BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002H02LP1|AL425028
(269 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1462 480 e-136
>3x_Contig1462
Length = 8247
Score = 480 bits (239), Expect = e-136
Identities = 259/269 (96%)
Strand = Plus / Plus
Query: 1 gaacatggaaagawaaagaaaactttcgaaaatgtcattaaccgggttccgcccttttaa 60
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4825 gaacatggaaagatcttgaaaactttcgaaaatgtcattaaccgggttccgcccttttaa 4884
Query: 61 aawctttatcaaagcwtgtggttttgaagtaccacggcagtaaatccagcwtcgtgtttg 120
|| |||||||||||| |||||||||||||| |||||||||| |||||||| |||||||||
Sbjct: 4885 aatctttatcaaagcttgtggttttgaagttccacggcagttaatccagcttcgtgtttg 4944
Query: 121 tgattatataaaggtacgggttggacaggtccttttgttggtctagtgaaggcagggtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4945 tgattatataaaggtacgggttggacaggtccttttgttggtctagtgaaggcagggtgt 5004
Query: 181 gactttcttgtgccaataatcggttctactttggtaatcctctttccttttttgcctggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5005 gactttcttgtgccaataatcggttctactttggtaatcctctttccttttttgcctggg 5064
Query: 241 tctaacawagaaatcatcattttaattga 269
||||||| |||||||||||||||||||||
Sbjct: 5065 tctaacatagaaatcatcattttaattga 5093
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1615
Number of Sequences: 1807
Number of extensions: 1615
Number of successful extensions: 20
Number of sequences better than 1.0e-20: 1
length of query: 269
length of database: 10,358,551
effective HSP length: 15
effective length of query: 254
effective length of database: 10,331,446
effective search space: 2624187284
effective search space used: 2624187284
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 49 (98.8 bits)